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Automorphisms between DNA Sequences from Primate BRCA1 Genes

Source: R/data_brca1_autm2.R
brca1_autm2.Rd

This is a AutomorphismList object carrying a list of pairwise automorphisms between the DNA sequences from the MSA of primate BRCA1 DNA repair gene. The data set brca1_aln2 has 41 DNA sequences and it contains the previous 20 primate variants found in 'braca1_aln' data set plus 21 single mutation variants (SMV) from the human sequence NM_007298 transcript variant 4. The location of each SMV is given in the heading from each sequence. The automorphisms were estimated from the brca1_aln MSA with function autZ64.

Usage

data("brca1_autm2", package = "GenomAutomorphism")

Format

AutomorphismList class object.