Simulated dataset of DMPs used in examples

Source: R/data_dmps.R

Each individuals sample includes 10000 cytosine positions

dmps

Format

dmps is an object from class 'pDMP' carrying in the meta-columns the following variables:

p1

methylation level from the reference sample

p2

methylation level from the treatment sample

TV

the total variation distance (difference of methylation levels)

hdiv

Hellinger divergence

wprob

the probabilities: \(wprob = 1 - CDF probability\)

dmps is an object from class 'pDMP' carrying the same meta-columns as 'HD' (dataset) plus the probabilities: \(wprob = 1 - CDF probability\). DMPs ('dmps') are obtained from potential DMPs (see PS) with selectDIMP function.